BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E12SP1|AL427034
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 1706 0.0
>3x_Contig1638
Length = 14042
Score = 1706 bits (858), Expect = 0.0
Identities = 877/885 (99%), Gaps = 2/885 (0%)
Strand = Plus / Minus
Query: 1 agaatttacttccaaacctttgcaccggaaaaattacttatgcggcgcaacaaagaaaga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3520 agaatttacttccaaacctttgcaccggaaaaattacttatgcggcgcaacaaagaaagg 3461
Query: 61 gagctgtagggaatattctatattcaggaaccggcgatgcctcgagaatggcacttcggg 120
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3460 g--ctgtagggaatattctatattcaggaaccggcgatgcctcgagaatggcacttcggg 3403
Query: 121 aaaacatacggcactttcgaacgcaacacgttttccacgcgagaatccgggtaataggta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3402 aaaacatacggcactttcgaacgcaacacgttttccacgcgagaatccgggtaataggta 3343
Query: 181 ccatttgagtckttcaatgatgactagcgaccatattttcgtagaacgtcactggactaa 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3342 ccatttgagtctttcaatgatgactagcgaccatattttcgtagaacgtcactggactaa 3283
Query: 241 aaagcctttcttatcaaatagcgatcgatttaatatacaaaacagagataaagctgggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3282 aaagcctttcttatcaaatagcgatcgatttaatatacaaaacagagataaagctgggtt 3223
Query: 301 tacttctactgcctgtagaaatgaccctttgacgaatctgctagaagacagatgggagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3222 tacttctactgcctgtagaaatgaccctttgacgaatctgctagaagacagatgggagat 3163
Query: 361 agataaagaaattcttatccaggaaaggkttctgattacgatgagatcaggatccatgtg 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 3162 agataaagaaattcttatccaggaaaggtttctgattacgatgagatcaggatccatgtg 3103
Query: 421 ctcagccgttcatgtagtttctgtctgaagaatgtttatactgtttatactactcatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3102 ctcagccgttcatgtagtttctgtctgaagaatgtttatactgtttatactactcatact 3043
Query: 481 gataagatgtgcagagaagaggagataagattttggaagcaggcagtgtagatcttatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3042 gataagatgtgcagagaagaggagataagattttggaagcaggcagtgtagatcttatta 2983
Query: 541 tcgtacacagttgttcgatgtcgttggtagtattctgatactatggcggcgtgaatctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2982 tcgtacacagttgttcgatgtcgttggtagtattctgatactatggcggcgtgaatctat 2923
Query: 601 aatttggttagtgctctgatataatgctgctttcagggcactcatcacgtgactgagcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2922 aatttggttagtgctctgatataatgctgctttcagggcactcatcacgtgactgagcat 2863
Query: 661 catttctcgctttaggttaccctactcgggaaatatatatgcatcacgtggcactgatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 catttctcgctttaggttaccctactcgggaaatatatatgcatcacgtggcactgatca 2803
Query: 721 gatttttttggtggttatatttgtgggagtgggcaacccacggtatgcagattgcatacc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2802 gatttttttggtggttatatttgtgggagtgggcaacccacggtatgcagattgcatacc 2743
Query: 781 gtgggtcctcttgttggtatacccatctatgcaagthacggtaaacgtcgaaccatgaat 840
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2742 gtgggttctcttgttggtatacccatctatgcaagtaacggtaaacgtcgaaccatgaat 2683
Query: 841 tgcctgatgagctgaaacaatacgtcggccctcatataawagggg 885
||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2682 tgcctgatgagctgaaacaatacgtcggccctcatataaaagggg 2638
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5208
Number of Sequences: 1807
Number of extensions: 5208
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)